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Machine learning with a reduced dimensionality representation of comprehensive Pentacam tomography parameters to identify subclinical keratoconus

journal contribution
posted on 2024-11-02, 19:03 authored by Ke Cao, Cornelia VerspoorCornelia Verspoor, Elsie Chan, Mark Daniell, Srujana Sahebjada, Paul Baird
Purpose: To investigate the performance of a machine learning model based on a reduced dimensionality parameter space derived from complete Pentacam parameters to identify subclinical keratoconus (KC). Methods: All 1692 available parameters were obtained from the Pentacam imaging machine on 145 subclinical KC and 122 control eyes. We applied a principal component analysis (PCA) to the complete Pentacam dataset to reduce its parameter dimensionality. Subsequently, we investigated machine learning performance of the random forest algorithm with increasing numbers of components to identify their optimal number for detecting subclinical KC from control eyes. Results: The dimensionality of the complete set of 1692 Pentacam parameters was reduced to 267 principal components using PCA. Subsequent selection of 15 of these principal components explained over 85% of the variance of the original Pentacam-derived parameters and input to train a random forest machine learning model to achieve the best accuracy of 98% in detecting subclinical KC eyes. The model established also reached a high sensitivity of 97% in identification of subclinical KC and a specificity of 98% in recognizing control eyes. Conclusions: A random forest-based model trained using a modest number of components derived from a reduced dimensionality representation of complete Pentacam system parameters allowed for high accuracy of subclinical KC identification.

Funding

Pathways to precision medicine in eye disease

National Health and Medical Research Council

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  1. 1.
    DOI - Is published in 10.1016/j.compbiomed.2021.104884
  2. 2.
    ISSN - Is published in 00104825

Journal

Computers in Biology and Medicine

Volume

138

Number

104884

Start page

1

End page

6

Total pages

6

Publisher

Elsevier

Place published

United Kingdom

Language

English

Copyright

© 2021 The Authors. Published by Elsevier Ltd. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).

Former Identifier

2006110528

Esploro creation date

2021-10-30

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