Standard reporting requirements for biological samples in metabolomics experiments: Environmental context
journal contribution
posted on 2024-11-01, 10:18authored byNorman Morrison, Dan Bearden, Jacob Bundy, Tim Collette, Felicity Currie, Matthew Davey, Nathan Haigh, David Hancock, Oliver JonesOliver Jones, Simone Rochfort, Susanna-Assunta Sansone, Dalibor Stys, Quincy Teng, Dawn Field, Mark Viant
Metabolomic technologies are increasingly being applied to study biological questions in a range of different settings from clinical through to environmental. As with other high-throughput technologies, such as those used in transcriptomics and proteomics, metabolomics continues to generate large volumes of complex data that necessitates computational management. Making sense of this wealth of information also requires access to sufficiently detailed and well annotated meta-data. Here we provide standard reporting requirements for describing biological samples, taken from an environmental context and involved in metabolomic experiments. It is our intention that these reporting requirements should guide and support the standardised annotation, dissemination and interpretation of environmental metabolomics meta-data.