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The role of atomic polarization in the thermodynamics of chloroform partitioning to lipid bilayers

journal contribution
posted on 2024-11-01, 05:28 authored by Igor Vorobyov, W Bennet, D Tieleman, Toby AllenToby Allen, S Noskov
In spite of extensive research and use in medical practice, the precise molecular mechanism of volatile anesthetic action remains unknown. The distribution of anesthetics within lipid bilayers and potential targeting to membrane proteins is thought to be central to therapeutic function. Therefore, obtaining a molecular level understanding of volatile anesthetic partitioning into lipid bilayers is of vital importance to modern pharmacology. In this study we investigate the partitioning of the prototypical anesthetic, chloroform, into lipid bilayers and different organic solvents using molecular dynamics simulations with potential models ranging from simplified coarse-grained MARTINI to additive and polarizable CHARMM all-atom force fields. Many volatile anesthetics display significant inducible dipole moments, which correlate with their potency, yet the exact role of molecular polarizability in their stabilization within lipid bilayers remains unknown. We observe that explicit treatment of atomic polarizability makes it possible to accurately reproduce solvation free energies in solvents with different polarities, allowing for quantitative studies in heterogeneous molecular distributions, such as lipid bilayers. We calculate the free energy profiles for chloroform crossing lipid bilayers to reveal a role of polarizability in modulating chloroform partitioning thermodynamics via the chloroform-induced dipole moment and highlight competitive binding to the membrane core and toward the glycerol backbone that may have significant implications for understanding anesthetic action.

History

Related Materials

  1. 1.
    DOI - Is published in 10.1021/ct200417p
  2. 2.
    ISSN - Is published in 15499618

Journal

Journal of Chemical Theory and Computation

Volume

8

Issue

2

Start page

618

End page

628

Total pages

11

Publisher

American Chemical Society

Place published

United States

Language

English

Copyright

Copyright © 2012 American Chemical Society

Former Identifier

2006029010

Esploro creation date

2020-06-22

Fedora creation date

2012-01-27

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